PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT33626.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 218aa MW: 25548.8 Da PI: 6.9695 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.1 | 2.4e-21 | 11 | 140 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkge 98 +G+rFhPt++el+ +yL + +k+++ + ++ v++y ePw+L ++++ yf ++++k++++ r +r++ +g+Wk +gk ++v++ +g+ PHT33626.1 11 MGYRFHPTNKELL-KYLLGFAINKPFPQQYQyMQLVNLYADkEPWELFDG--TKNNTGYFITQQNKEKEQHVRVKRTVGiNGTWKLQGKVNKVFDDQGK 106 7************.77888877888555444499999997559****633..355677**********9*******66569****************** PP NAM 99 lvglkktLvfy....kgrapkgektdWvmheyrl 128 l+g k L + ++++++ + +W+m ey+l PHT33626.1 107 LMGYVKNLKYKphpqHKKSSDNPNGEWLMTEYSL 140 **********987765566667799*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSSHHQAKDM MGYRFHPTNK ELLKYLLGFA INKPFPQQYQ YMQLVNLYAD KEPWELFDGT 60 KNNTGYFITQ QNKEKEQHVR VKRTVGINGT WKLQGKVNKV FDDQGKLMGY VKNLKYKPHP 120 QHKKSSDNPN GEWLMTEYSL YDRYVDPKKI KNKGFVVCKI KKKEEKHGDN KQGVNNDEDA 180 AEYIDSVLQD EEDISIINEN NEYLEGDEVE EHIIAILG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 5e-16 | NAC family protein |