PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT33457.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 173aa MW: 20020.8 Da PI: 9.6556 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++++G g+W+ ++ g+ R++k+c++rw +yl PHT33457.1 14 KGSWSKQEDQKLIDYITKHGEGCWRDLPKAAGLLRCGKSCRLRWMNYL 61 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 57.6 | 2.9e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++Ed+l+++++++lG++ W++Ia +++ gRt++++k++w+++l PHT33457.1 67 RGNFSEDEDDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MRKPGCDNKE EMHKGSWSKQ EDQKLIDYIT KHGEGCWRDL PKAAGLLRCG KSCRLRWMNY 60 LNPNLKRGNF SEDEDDLIIK LHALLGNRWS LIAGRLPGRT DNEVKNYWNS HLRRKLIKMG 120 IDPKNHNISH YLRIKRLEYF QENSIKSENN AVISDATSSN CVTSSLPDLN SLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 5e-70 | MYB family protein |