PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32903.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HB-other

Protein Properties

Length: 520aa MW: 59012.6 Da PI: 9.0156

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.1	1.3e-17	18	73	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r+R t+ q e Le+++++++yp+++++ e A++lgLte+qV+ WF+ rR k+k+ PHT32903.1 18 RPRIIKTRAQREGLEKFYKEHKYPTESMKLEVAHSLGLTEKQVSGWFCHRRLKDKR 73 8999**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
DSREMHSEED KGHIGKNRPR IIKTRAQREG LEKFYKEHKY PTESMKLEVA HSLGLTEKQV 60 SGWFCHRRLK DKRLLRREIN ANGRQDRSSG IIQDRGSGFR QDSCGSTKQG DDKYFDHREV 120 ESRRLTGPEV SAADVMRDVD VQYRAESNLM EDTPSGSSSS LRDARFSQNV ESLDMATSRY 180 LPCNEPTGLK SVKPRTGPSG YLKVKGKVEN ASITAVKRQL GSLYRRDGPP LSVEFDMLPP 240 GAFESPVQTP VDDPEYTGEP VLAPTADFAE VYKQSDSRIG YGLISKTNSR VSDLDGASFK 300 KSSKSAYPEY YINQKPRQNS SMHNDDRYYL GRNSSTEMRK VSGREVGVDG RYNNMFMAKR 360 DGTEIKTSPG SSGGFRSPYT GKVNREQVAP RFTNCNEASL KIMEEEDSER KPSNFVRKEI 420 KQRYFPERVL SGKVEKDYLH VERPAVDESY NVDRMKMPWE NEMKAAKRAR DEAPSHQEYM 480 RKAPVTIMPS QTNHPIRSAA ELSSSFSEDD KTEETSSFEG

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

DSREMHSEED KGHIGKNRPR IIKTRAQREG LEKFYKEHKY PTESMKLEVA HSLGLTEKQV  60
SGWFCHRRLK DKRLLRREIN ANGRQDRSSG IIQDRGSGFR QDSCGSTKQG DDKYFDHREV  120
ESRRLTGPEV SAADVMRDVD VQYRAESNLM EDTPSGSSSS LRDARFSQNV ESLDMATSRY  180
LPCNEPTGLK SVKPRTGPSG YLKVKGKVEN ASITAVKRQL GSLYRRDGPP LSVEFDMLPP  240
GAFESPVQTP VDDPEYTGEP VLAPTADFAE VYKQSDSRIG YGLISKTNSR VSDLDGASFK  300
KSSKSAYPEY YINQKPRQNS SMHNDDRYYL GRNSSTEMRK VSGREVGVDG RYNNMFMAKR  360
DGTEIKTSPG SSGGFRSPYT GKVNREQVAP RFTNCNEASL KIMEEEDSER KPSNFVRKEI  420
KQRYFPERVL SGKVEKDYLH VERPAVDESY NVDRMKMPWE NEMKAAKRAR DEAPSHQEYM  480
RKAPVTIMPS QTNHPIRSAA ELSSSFSEDD KTEETSSFEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	6e-57	HB-other family protein