PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT32361.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 352aa MW: 39454 Da PI: 7.6188 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.4 | 1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d++k +G g W+ +++ g++R++k+c++rw++yl PHT32361.1 14 KGAWTPIEDKILIDYIKVHGEGKWRNLPNRAGLKRCGKSCRLRWLNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.7 | 4.2e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ PHT32361.1 67 RGNISPDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 7899******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MGRKPCCSKE GLNKGAWTPI EDKILIDYIK VHGEGKWRNL PNRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NIGRKLQEAK 120 GSGQPNRVTS SYRPRNRSSH AKSANPNPIT QLQKNNQEQT IQQDSNCLLQ TDVGREGSSS 180 SSSTCLVVCN KAIRCTKIFI SPQNTDQSVN EITQIDNNDK AMTEGNATTN IVTSSSSSLS 240 EQQQQPVSES YSPTNLSVEM ENYNFNFMFG LDVDDPFLSE LLSVPDLRDQ ILENSTISST 300 VDAGDEVGDC NISVKKERQR SYFPPSSSQI SIFSEGTQHN DLELWINGFS SC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 3e-62 | MYB family protein |