PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31708.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 278aa    MW: 31410.1 Da    PI: 4.5613
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.62.2e-1861274127
         NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
                  ++FhP + el+ + Lk+ +++++l++   ik ++iy    Pw+L     +e+k+ yf ++ +k++++++r+ r+  +g+W+ + +  +++++ +g++v
  PHT31708.1   6 SIQFHPVEAELI-NLLKRFLKDEHLRC--PIKFAEIYGDqPPWQLY---GSEDKSGYFITPLKKRKKSDQRHARTCGNGTWRGQTSAVPIKNRkGGSVV 98 
                 579*********.99*********988..7999999976368***5...5678899**********************************99867888* PP

         NAM 101 glkktLvfy.kgrapkge.ktdWvmheyr 127
                 g ++  ++  kg++ +g+  t+W+m ey 
  PHT31708.1  99 GYRRNYIYTsKGNKTSGSaTTNWLMREYF 127
                 ********9666666665389*******6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MSSAVSIQFH PVEAELINLL KRFLKDEHLR CPIKFAEIYG DQPPWQLYGS EDKSGYFITP  60
LKKRKKSDQR HARTCGNGTW RGQTSAVPIK NRKGGSVVGY RRNYIYTSKG NKTSGSATTN  120
WLMREYFVGD DFFKVNNIPK QDYALCRIKK HVRGKMDDDD DAVNMEEQDA LETIQGMLLE  180
PDSTCCTTQE VAEETDQWES IINEVCDEKI DGVENTRALV HGEYDLSDVQ EDGADVIGSN  240
GIWEAINGIL NDVTVDIPDD LWLDVDHQPP LLLISSST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16266KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-14NAC family protein