PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT30635.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | SRS | ||||||||
Protein Properties | Length: 193aa MW: 22042.7 Da PI: 8.3187 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 162.2 | 3.1e-50 | 17 | 144 | 5 | 154 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103 +CqdCGnqakkdC + RCRtCCksr ++C+thvk tW+p++ rr r+ l++ ++ ++kr re+ ++ +al +t+ + PHT30635.1 17 YRRCQDCGNQAKKDCPFLRCRTCCKSRRYQCQTHVKITWIPVSTRRPRH--LSTI--------QQPNPKRYREN--QNPAALLQTE----------GEE 93 568********************************************83..3332........34456777765..3344443333..........346 PP DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +lP+evs +avfrcvrvss+d+ +++aYqt+v+i+GhvfkGiLydqG+++ PHT30635.1 94 ELPAEVSLPAVFRCVRVSSLDNLVDQYAYQTSVNIAGHVFKGILYDQGPDD 144 7************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MMRSEDDQGI TISSSNYRRC QDCGNQAKKD CPFLRCRTCC KSRRYQCQTH VKITWIPVST 60 RRPRHLSTIQ QPNPKRYREN QNPAALLQTE GEEELPAEVS LPAVFRCVRV SSLDNLVDQY 120 AYQTSVNIAG HVFKGILYDQ GPDDDDNIPK ETSSRGFHQH LLTTNLTTPS TSYPTPFTNF 180 MPGTQYFQCP KSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 5e-47 | SRS family protein |