PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30466.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 279aa MW: 31122 Da PI: 6.0415

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	95.2	9.9e-30	10	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppG rF P+d++++ +yL +k ++++ ++ ike+d+y+++P +Lp +++k+w++++ r k g r++ + gyW++ g ++ PHT30466.1 10 LPPGTRFYPSDQQIIRHYLSPKNDADHrnDVQFDLIKEIDLYNFDPVNLPDsarflyGRGGRKKHWFYYVARVLK---GGRRRISGGGGYWRKRGGVRD 105 79******************9888754333478**********95467654223366799999998775...5677678899******* PP NAM 92 vlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128 v+s+ ++ +vg++k++vfy+g ++++ktdW+m ey+l PHT30466.1 106 VVSEgaGKGVVGTRKSFVFYSGdCGKNAVKTDWLMYEYAL 145 9777788*******995578899*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGDNTALFSL PPGTRFYPSD QQIIRHYLSP KNDADHRNDV QFDLIKEIDL YNFDPVNLPD 60 SARFLYGRGG RKKHWFYYVA RVLKGGRRRI SGGGGYWRKR GGVRDVVSEG AGKGVVGTRK 120 SFVFYSGDCG KNAVKTDWLM YEYALAGHPM ASFVLCRVFI KSHHKNNLSG HIFSSYGEET 180 IAMVRHIGIQ YDGTAALVTD SKMHDENTID QENDVSKLPG GLATDVNGQA VAENVTEQIG 240 FESDRPPFLD GFSVEELMAI EEGDFIELDD LLCPLLGIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	6e-20	NAC family protein