PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30127.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 404aa MW: 45505.3 Da PI: 9.2929

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.8	2.6e-50	27	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 + pGfrF+Ptdeel+++yLkkk+eg++ + evi+ev+i k+ePwdLp k+v ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++ PHT30127.1 27 MFPGFRFSPTDEELISYYLKKKLEGSDKCV-EVISEVEIWKHEPWDLPaKSVIQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKS-SSN 123 579**********************777.99***********667777899**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g+k+tLvf++grapkg++t+W+mhey + PHT30127.1 124 VIGTKRTLVFHTGRAPKGQRTQWIMHEYCM 153 **************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MENGHVSTSS RNNNNNVEIS IATASSMFPG FRFSPTDEEL ISYYLKKKLE GSDKCVEVIS 60 EVEIWKHEPW DLPAKSVIQS DNEWFFFSPR GRKYPNGSQS KRATESGYWK ATGKERNVKS 120 SSNVIGTKRT LVFHTGRAPK GQRTQWIMHE YCMSGNTNYQ DSMVVCRLRK NSEFHLNDTP 180 RNQRNQLVAT DSATALSGAG QLGSLELVNV GDCCSKEGSS SFRSHSVEQI DSGSESDRPT 240 KELSQHDSSG HFKDYDGEED WFADIMKDDI IELDDSSLNA RPISMIPVRA ESSEISNHEA 300 QAAMSSVVPF QGTANRRLRL VRQVVTQCRV KGSKPYKAIK MNKIGVGTTS SARWFSNMFS 360 IKWMRQYVIF LVTLTLLVML LSLLEVSQQV KPRKRLLILA SSRS

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MENGHVSTSS RNNNNNVEIS IATASSMFPG FRFSPTDEEL ISYYLKKKLE GSDKCVEVIS  60
EVEIWKHEPW DLPAKSVIQS DNEWFFFSPR GRKYPNGSQS KRATESGYWK ATGKERNVKS  120
SSNVIGTKRT LVFHTGRAPK GQRTQWIMHE YCMSGNTNYQ DSMVVCRLRK NSEFHLNDTP  180
RNQRNQLVAT DSATALSGAG QLGSLELVNV GDCCSKEGSS SFRSHSVEQI DSGSESDRPT  240
KELSQHDSSG HFKDYDGEED WFADIMKDDI IELDDSSLNA RPISMIPVRA ESSEISNHEA  300
QAAMSSVVPF QGTANRRLRL VRQVVTQCRV KGSKPYKAIK MNKIGVGTTS SARWFSNMFS  360
IKWMRQYVIF LVTLTLLVML LSLLEVSQQV KPRKRLLILA SSRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	9e-85	NAC family protein