PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT29882.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 529aa MW: 59068.5 Da PI: 4.5352

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT29882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175	2.2e-54	6	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yL++k++g++++ + i+e+diykvePwdLp k ++k+++ ewyfFs dkky +g r+nrat++gyWk+tgkd++v+++k+ PHT29882.1 6 LAPGFRFHPTDEELVRYYLRRKIHGRPFKS-DPISEIDIYKVEPWDLPgKsRLKTRDLEWYFFSVLDKKYGNGARTNRATEKGYWKTTGKDRAVHRNKS 103 579************************9.89***********6347777888************************************* PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLv+++grap+g++t+Wvmheyrl PHT29882.1 104 QVVGMKKTLVYHSGRAPRGQRTNWVMHEYRL 134 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MASKSLAPGF RFHPTDEELV RYYLRRKIHG RPFKSDPISE IDIYKVEPWD LPGKSRLKTR 60 DLEWYFFSVL DKKYGNGART NRATEKGYWK TTGKDRAVHR NKSQVVGMKK TLVYHSGRAP 120 RGQRTNWVMH EYRLIDEELK RVGIPQDAFV LCRVFQKSGA GPKNGEQYGA PFIDEEWEED 180 ELQLLPKDEA AEEFVFGDDI YLDANELDQI LGTGTAVAAL PLDYSYGENG STEETNGSSD 240 AQNWLQQPDE LKPIDLAVPK NFGADQVNHE YIGESSQNMN SEDGDYLLNE PIENVSKDLQ 300 FNGEAFLEAN DLSNPVEVDS SSYDMLEEYL TYFDANDDFQ NMSFDSSVLF GNDDQISDQA 360 LLAEKNIGEV TQKLNTPNEG LGEDKNGFAS ASSKLAPTKF GSDYQYPYMK RASQMLGNIQ 420 APPAFASEFP TEDAILRLNS LARSASSVQL SAGLHMSAGG NGTGWPLGKH GDYNIILSFG 480 LSRGGSDDSG SIHPGKTTST VSRGWFYYLF FSFLMLSISF RIGTIICSS

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MASKSLAPGF RFHPTDEELV RYYLRRKIHG RPFKSDPISE IDIYKVEPWD LPGKSRLKTR  60
DLEWYFFSVL DKKYGNGART NRATEKGYWK TTGKDRAVHR NKSQVVGMKK TLVYHSGRAP  120
RGQRTNWVMH EYRLIDEELK RVGIPQDAFV LCRVFQKSGA GPKNGEQYGA PFIDEEWEED  180
ELQLLPKDEA AEEFVFGDDI YLDANELDQI LGTGTAVAAL PLDYSYGENG STEETNGSSD  240
AQNWLQQPDE LKPIDLAVPK NFGADQVNHE YIGESSQNMN SEDGDYLLNE PIENVSKDLQ  300
FNGEAFLEAN DLSNPVEVDS SSYDMLEEYL TYFDANDDFQ NMSFDSSVLF GNDDQISDQA  360
LLAEKNIGEV TQKLNTPNEG LGEDKNGFAS ASSKLAPTKF GSDYQYPYMK RASQMLGNIQ  420
APPAFASEFP TEDAILRLNS LARSASSVQL SAGLHMSAGG NGTGWPLGKH GDYNIILSFG  480
LSRGGSDDSG SIHPGKTTST VSRGWFYYLF FSFLMLSISF RIGTIICSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-126	NAC family protein