PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT29836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 245aa MW: 27821.4 Da PI: 4.7557 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.1 | 3e-18 | 6 | 127 | 4 | 127 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 ++FhP + el+ + Lk+ ++g++l++ ik ++iy Pw+L +e+k+ yf ++ +k++++++++ r+ +g+W+ + + +++++ +g++v PHT29836.1 6 SIQFHPVEAELI-NLLKRFLKGEHLRC--PIKFAEIYGDqPPWQLY---GSEDKSGYFITPLKKRKKSDQKHARTCGNGTWRGQTSAVPIKNRkGGSVV 98 579*********.99*********998..7999999976368***5...5678899**********************************99867888* PP NAM 101 glkktLvfy.kgrapkge.ktdWvmheyr 127 g ++ ++ kg++ +g+ t+W+m ey PHT29836.1 99 GYRRNYIYTsKGNKTSGSaTTNWLMREYF 127 ********9666666665389*******6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MSSAVSIQFH PVEAELINLL KRFLKGEHLR CPIKFAEIYG DQPPWQLYGS EDKSGYFITP 60 LKKRKKSDQK HARTCGNGTW RGQTSAVPIK NRKGGSVVGY RRNYIYTSKG NKTSGSATTN 120 WLMREYFVGD DFFKVNNIPK QDYALCRIKK HVRGKMDDDD DAVNMEEQDA LETIQGMLLE 180 PDSTCCTTQE VAEETDQWES IINEVCDEKI DGVENAVMNW ADDLFIDITD LGDIICCPSE 240 SILEI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 62 | 66 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 6e-15 | NAC family protein |