PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT29571.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 326aa MW: 37315.9 Da PI: 7.0266

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT29571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	183.7	4.3e-57	16	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL++kv ++++ + ++i evd++kvePwdLp ++k +ekewyfF+ rdkky+tg+r+nrat++gyWkatgkd+e+++ +++l PHT29571.1 16 LPPGFRFHPTDEELITHYLTPKVLDSSFCA-RAIGEVDLNKVEPWDLPWRAKMGEKEWYFFCMRDKKYPTGQRTNRATEAGYWKATGKDREIFK-SKTL 112 79***********************998.89***********888999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfykgrap+gekt+Wvmheyrl PHT29571.1 113 VGMKKTLVFYKGRAPRGEKTNWVMHEYRL 141 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
METMCGFGGQ EEEMELPPGF RFHPTDEELI THYLTPKVLD SSFCARAIGE VDLNKVEPWD 60 LPWRAKMGEK EWYFFCMRDK KYPTGQRTNR ATEAGYWKAT GKDREIFKSK TLVGMKKTLV 120 FYKGRAPRGE KTNWVMHEYR LDGKYSVHNL PKTAKNECVI CRIFKKSSGG KKIPISNLIR 180 SNNMTDNSRS SNLPPLTNMS PYNNDTKITT TARSSGETCN SHVTCFSDSV EDQKPQTHHH 240 HPQPLSCSPV SVEFPEDPSN VPNQSMSYID NFQYADSGLM QDNSIMRLLL DNNYGSESKQ 300 NLRGYEDHDF NITSTGPVDI DCLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-120	NAC family protein