PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT27607.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 384aa MW: 42806.5 Da PI: 7.6129

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT27607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.3	1.3e-18	15	94	14	99
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + + +p kfa++ ++ ++++ led+sgr+W+v++ +k++g+ +++GW eF +++gLk+g+f+vF+++ ++ f v++f + PHT27607.1 15 KDMHFPPKFARSVSHL--TDQKTYLEDSSGRRWRVRV--CKHGGSLAIKQGWPEFSSEHGLKVGEFLVFHYVPDKHF--IVQIFGT 94 44899****99755..4568***********..******************************987888..9999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MLQTIVPSRI QKISKDMHFP PKFARSVSHL TDQKTYLEDS SGRRWRVRVC KHGGSLAIKQ 60 GWPEFSSEHG LKVGEFLVFH YVPDKHFIVQ IFGTSACEKI KFCSDVGKGR KRARTYLEAT 120 NPVELLHTTA IDSVKKKSRL SAALESEKAT YKPNIVNFAV NVDTVTEKGR SVHSAIHVDE 180 SFCVIDKNTQ YDQEDDRLCL HLSSFEMPAS KPVAEGISSP LKGNNGNDNH VDTNSRSKTE 240 PNLNLENKKL NSEALLSQLE AGIKATNMVS RPAEDVPPLA EDIPPLGPKY KNSYEVSQFP 300 TEPRVIKKEL EEAREARVIK KELEDMATEA FSPARAIHGG EHANGNQKVI KCEPADSRDA 360 PSLNAVNYSC LLEIDGRDFL VNLV

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MLQTIVPSRI QKISKDMHFP PKFARSVSHL TDQKTYLEDS SGRRWRVRVC KHGGSLAIKQ  60
GWPEFSSEHG LKVGEFLVFH YVPDKHFIVQ IFGTSACEKI KFCSDVGKGR KRARTYLEAT  120
NPVELLHTTA IDSVKKKSRL SAALESEKAT YKPNIVNFAV NVDTVTEKGR SVHSAIHVDE  180
SFCVIDKNTQ YDQEDDRLCL HLSSFEMPAS KPVAEGISSP LKGNNGNDNH VDTNSRSKTE  240
PNLNLENKKL NSEALLSQLE AGIKATNMVS RPAEDVPPLA EDIPPLGPKY KNSYEVSQFP  300
TEPRVIKKEL EEAREARVIK KELEDMATEA FSPARAIHGG EHANGNQKVI KCEPADSRDA  360
PSLNAVNYSC LLEIDGRDFL VNLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49475.1	6e-13	B3 family protein