PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT27524.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | B3 | ||||||||
Protein Properties | Length: 252aa MW: 27840.2 Da PI: 9.2543 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 47.8 | 2.6e-15 | 60 | 128 | 27 | 99 |
---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ ++ + ++l+ +sg +W+v+l + +++ +l++GWkeFv a+ L+e D ++Fk++g+s+f v+vf++ PHT27524.1 60 NLREKLGDSVSLTGPSGATWNVRL--TLIGDALFLKDGWKEFVGAHSLEEDDLLIFKYNGSSRF--DVSVFDR 128 555667779***************..889999**************************998999..9999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSLVRVGAEI GVQAEVRVRV ELGLEVKGSR DKCDKGAYRL KVGFRNIRTL QGHSQKICHN 60 LREKLGDSVS LTGPSGATWN VRLTLIGDAL FLKDGWKEFV GAHSLEEDDL LIFKYNGSSR 120 FDVSVFDRQS LCEKEASCFV KKCEHADVAS RSRTKRHTPR EYSSRDVSEA PPTKKPNLAA 180 TPTSEDTSRS SSHDEYEPPA KKKTLASTST SVDTNEFSSH NECESPTEKK TTLASTSTSR 240 TRSARANAKL LS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 156 | RSRTKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 8e-22 | B3 family protein |