PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT27496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 236aa MW: 26968.2 Da PI: 9.1494 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.1 | 7.5e-19 | 94 | 224 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrd....kkyatgkrknr.atksgyWkatgkdkev 92 +rFhPtdeel+ +yL k v+ k+ ++ + i+ d++ + +Pw++ + +++ +k yfF++ + kk++ g+r r ++ g Wk +k+v PHT27496.1 94 LRFHPTDEELI-RYLLKFVSCKNYSC-DNIRFEDLFgNQKPWEIFEsnssgDAEEAKKVKYFFTQLHaqlkKKKSGGTRFIRtVIGGGSWKGLDCEKSV 190 69*********.9**********999.7799999872569****6323443333344455***97651111445568899997889************* PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + +lvg kk + + ++ W+m ey+l PHT27496.1 191 YD-GPKLVGHKKNYRYQ-HKGYQADDVVWTMREYSL 224 **.999********997.67777789********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MMILLVREPD CDYCSVKVVL PGKEYDAPAN GGFKRWFRYS VAAATVISEC RIYIPSVVSP 60 HGSRTKLLVL VLLFCDPFGL LSQLGVCPNG SLILRFHPTD EELIRYLLKF VSCKNYSCDN 120 IRFEDLFGNQ KPWEIFESNS SGDAEEAKKV KYFFTQLHAQ LKKKKSGGTR FIRTVIGGGS 180 WKGLDCEKSV YDGPKLVGHK KNYRYQHKGY QADDVVWTMR EYSLDEKILK ALRRDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 2e-13 | NAC family protein |