PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT27492.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 399aa MW: 45869.1 Da PI: 4.9965

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT27492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67.3	4.2e-21	4	132	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk...kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 G+rFhP+deel+ +yL k v+ k+ ++ + i+ d+y +Pw++ + + + ++k++ yfF+k +kk++ g+r r ++ g Wk +k+v PHT27492.1 4 LGIRFHPRDEELI-RYLLKFVSCKNYSC-DNIRLDDLYGNkKPWEIFEsnsT--GgdgDTKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKSV 98 59*********.9******999.7899999996549632331..2333333335**************8889********* PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + +lvg kk + + ++ W+m ey+l PHT27492.1 99 YD-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 132 .99*******996.45556679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MGLLGIRFHP RDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWEIFES NSTGGDGDTK 60 NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA 120 DDVVWTMREY SLDEKILKAL RRRSLMHHED VVLCCVKRKI NVHARDHKEL SDCMTMEITS 180 GDEFAAAMDA TLQTTQQYDS CLLNRFTSSD EHNNVFHELQ QDQNSEQLIN QVQNIEEAAP 240 FARNHYGYVA SYIEQGTANF HDSCPVYPST LSEHNAFQLQ QDQNSEQVNV VQENIIEEAV 300 PLAQYHNDDV TSYSEKGATN FQDYNIDCYT GYFFKATFSS TLADLLNDIG TQPQLPPICI 360 DESGYDYQLP QKIVTCPMAQ RSTDFSSQSE LYDLSENIF

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MGLLGIRFHP RDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWEIFES NSTGGDGDTK  60
NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA  120
DDVVWTMREY SLDEKILKAL RRRSLMHHED VVLCCVKRKI NVHARDHKEL SDCMTMEITS  180
GDEFAAAMDA TLQTTQQYDS CLLNRFTSSD EHNNVFHELQ QDQNSEQLIN QVQNIEEAAP  240
FARNHYGYVA SYIEQGTANF HDSCPVYPST LSEHNAFQLQ QDQNSEQVNV VQENIIEEAV  300
PLAQYHNDDV TSYSEKGATN FQDYNIDCYT GYFFKATFSS TLADLLNDIG TQPQLPPICI  360
DESGYDYQLP QKIVTCPMAQ RSTDFSSQSE LYDLSENIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-10	NAC family protein