PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27223.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 324aa    MW: 35426 Da    PI: 10.6502
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.21.9e-08226275255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GV+ ++ + ++ A  rdp+    +  ++ lg+f+t ee a+a++ ++ +++g
  PHT27223.1 226 HYRGVWKRP-SAKYTAATRDPR----KiCNVLLGTFDTTEEGAQAYDTMAIEFRG 275
                 6*****999.7******9**83....359*********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGNEIENLKT NEVKLKSIAT NQLTQQCAEL SRSEDIKISE LEGDVGTLRK THNVYQATIA  60
GTSRFVESPG LQELQIMIGS GMVRQLMSRR MEMQNRVFNT AERSVVVKRT DDLNSTKVTV  120
STLLQLNVKL VPIGLGVTGK VVAMLPRGHG FKPWKQPLAE MQGPKKHKNR KGATRVENVN  180
GGVAKAAARE VKVNGGVAKA AAREVKVNGG VAKAEEKVKG VAEEVHYRGV WKRPSAKYTA  240
ATRDPRKICN VLLGTFDTTE EGAQAYDTMA IEFRGVKVKT NFLNLMDKMN RTPRQVSTVE  300
SLNVVAVVAI QPSPLPLPPP QPPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.11e-19ERF family protein