PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT26312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 157aa MW: 18202.6 Da PI: 8.6225 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.8 | 4.4e-53 | 12 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGf FhPtdee v +yL+kk+++++++l +vi+++d+y++ePwdL+ k + ++e+kewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k PHT26312.1 12 VPPGFLFHPTDEEPVGYYLRKKIAAQNIDL-DVIRDIDLYRIEPWDLQgKcgMGYEEQKEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD-K 108 69****************************.9***************953544445778**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+g++ktLvfy+grap+g+kt+W+mheyr+ PHT26312.1 109 SKLIGMRKTLVFYRGRAPNGHKTEWIMHEYRF 140 99****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MMDANESSSS CVPPGFLFHP TDEEPVGYYL RKKIAAQNID LDVIRDIDLY RIEPWDLQGK 60 CGMGYEEQKE WYFFSHKDKK YPTGTRTNRA TMAGFWKATG RDKAVYDKSK LIGMRKTLVF 120 YRGRAPNGHK TEWIMHEYRF ESQENSPSQA SLASISL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 4e-91 | NAC family protein |