PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT25449.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 181aa MW: 19313.6 Da PI: 10.6478 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 24.8 | 4.3e-08 | 149 | 177 | 31 | 59 |
T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 31 gCpvkkkversaedpkvveitYegeHnhe 59 + ++kk+ver+ +dp ++++tY++eH+h+ PHT25449.1 149 SATAKKHVERAMDDPMMLIMTYKEEHRHT 177 5689************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MVGRTGHARL CRAPIQAVQA QAQAKVHVHD SLTSLSLSPY GYMEKERVLA PASLFIVAPV 60 AALVQTGLML GFRKPRVNVV VVAGASNGAR VGDMKWKDAF GSMKNGISSS FLSSATGEGS 120 RSISSVAILS SSMLLCLMVK AISAGKQPSA TAKKHVERAM DDPMMLIMTY KEEHRHTQVA 180 M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 6e-10 | WRKY family protein |