PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027127047.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 434aa MW: 47278.4 Da PI: 5.934

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027127047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.7	1.1e-27	156	210	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++ XP_027127047.1 156 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 210 5689***************.******************************86 PP
2	Myb_DNA-binding	37.8	4.3e-12	159	208	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ XP_027127047.1 159 VDWTPELHRRFVQAVEQLGVDkaVPSRILEIMGiDCLTRHNIASHLQKYR 208 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MLAVSPLRTT KDERQDEMES FENGGDDFPD FSCGNLLDSI DFDDLFVGIN DEDVLPDLEM 60 DPEMLAEFSL SGGEESEITT TSTSNEKMEE NSAKEEVDKA NYSGPDASSG STLTQTDDMV 120 MSKRDESVAA NPSAKEADKA RKSSTQSKAN PQGKRKVKVD WTPELHRRFV QAVEQLGVDK 180 AVPSRILEIM GIDCLTRHNI ASHLQKYRSH RKHLLAREAE AANWSQRRQM YGAAAAPAAA 240 GGKREMNHWI APTMGFPPMA PMPHFRPLHV WGHPSVDQSL MPVWPKHLGP SPPPPPVTWA 300 PAAPAHPPTP PPDPSFWHSH HARVPNSLTP GTPCFPPHLA PTRFPTPPVP GIPPPALYKV 360 DPGIAVPTAP AGQPVPQPPI DFHPSKESID AAIGDVLSKP WQPLPLGLKP PSVDSVLVEL 420 HRQGISRIPP TACV

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MLAVSPLRTT KDERQDEMES FENGGDDFPD FSCGNLLDSI DFDDLFVGIN DEDVLPDLEM  60
DPEMLAEFSL SGGEESEITT TSTSNEKMEE NSAKEEVDKA NYSGPDASSG STLTQTDDMV  120
MSKRDESVAA NPSAKEADKA RKSSTQSKAN PQGKRKVKVD WTPELHRRFV QAVEQLGVDK  180
AVPSRILEIM GIDCLTRHNI ASHLQKYRSH RKHLLAREAE AANWSQRRQM YGAAAAPAAA  240
GGKREMNHWI APTMGFPPMA PMPHFRPLHV WGHPSVDQSL MPVWPKHLGP SPPPPPVTWA  300
PAAPAHPPTP PPDPSFWHSH HARVPNSLTP GTPCFPPHLA PTRFPTPPVP GIPPPALYKV  360
DPGIAVPTAP AGQPVPQPPI DFHPSKESID AAIGDVLSKP WQPLPLGLKP PSVDSVLVEL  420
HRQGISRIPP TACV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	3e-85	G2-like family protein