PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027125721.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 248aa MW: 27352.5 Da PI: 4.6928 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.3 | 3.6e-05 | 39 | 88 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r + erE+ R+++N+ f L l + + + Ka++L +A++++k++ XP_027125721.1 39 KRIHKAEREKMKREHLNDLFLSLANALEVS----EETNGKASVLSEAIRFVKDM 88 688899*********************998....67899999*******99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MSMSSEESPE STLEPVSRAV QTPTTKCQSG RKHQGKVPKR IHKAEREKMK REHLNDLFLS 60 LANALEVSEE TNGKASVLSE AIRFVKDMLA QIESLRSENA ALSSESQYMT MEKEELQDET 120 TSLESQIAEL QNQLRERVGE AELDLNATPE GQFDGSTPHQ VDDCFRFPAL GPAIQQPQNV 180 KPVYVIPLCS DPSVFQQPGN AETASSPLTM VSKPQARYPT PADTWTSQLL EKHPDLGGGD 240 EHCGGRSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 5e-51 | bHLH family protein |