PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027125217.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 178aa    MW: 19696.7 Da    PI: 7.8248
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027125217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer85.17.5e-27858457
     ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                      Y+eC++NhAa+lG +a+DGCgEf+ +   ++++ +l CaACgCHRnFHR+ +
  XP_027125217.1  8 EFYRECQRNHAANLGNYATDGCGEFLLD---QTSPGTLLCAACGCHRNFHRKLT 58
                    67*************************8...6789****************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MEGENANEFY RECQRNHAAN LGNYATDGCG EFLLDQTSPG TLLCAACGCH RNFHRKLTYG  60
ANYNRGSNSN QETATEMMEY SGGGDDGSGG GQQAAESPDR MSSKKRLRTK FTPDQKEKML  120
AFAEKLGWKL QRKDMEDEVE RFCSSIGVNR KVFKVWMHNH KNSSSASTSA GNASSLTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-40ZF-HD family protein