PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027125216.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ZF-HD | ||||||||
Protein Properties | Length: 178aa MW: 19696.7 Da PI: 7.8248 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 85.1 | 7.5e-27 | 8 | 58 | 4 | 57 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 Y+eC++NhAa+lG +a+DGCgEf+ + ++++ +l CaACgCHRnFHR+ + XP_027125216.1 8 EFYRECQRNHAANLGNYATDGCGEFLLD---QTSPGTLLCAACGCHRNFHRKLT 58 67*************************8...6789****************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MEGENANEFY RECQRNHAAN LGNYATDGCG EFLLDQTSPG TLLCAACGCH RNFHRKLTYG 60 ANYNRGSNSN QETATEMMEY SGGGDDGSGG GQQAAESPDR MSSKKRLRTK FTPDQKEKML 120 AFAEKLGWKL QRKDMEDEVE RFCSSIGVNR KVFKVWMHNH KNSSSASTSA GNASSLTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-40 | ZF-HD family protein |