PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027123440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 234aa MW: 26461.9 Da PI: 8.6273 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.4 | 1.3e-08 | 114 | 161 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR +iN+++ L++++P + +k + a +L + ++Y++sLq XP_027123440.1 114 SHSLAERVRRGKINERLRCLQDIVPGC----HKTMGMAVMLDEIINYVQSLQ 161 8*************************9....788*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MEMMSQFPEL NPGALDSSNF TNVQPSMGFS FHERSHLFSA YDHTLHEGKK RKLTDTPESS 60 SANSSAQISE NGSRTKNCSQ ITGKGKRIRS NRKDEEKPKE VVHVRAKRGQ ATDSHSLAER 120 VRRGKINERL RCLQDIVPGC HKTMGMAVML DEIINYVQSL QNQVEFLSMK LTAASNFYDF 180 NRETDTIDTL QRAKAFEAMK MQKLMKEEFD GVPSTQVGPL DQTFGCYPSL PFNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18400.1 | 2e-61 | bHLH family protein |