PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027122695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 188aa MW: 21286.9 Da PI: 10.5484 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.7 | 1.1e-09 | 22 | 72 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + +Er+RR r+N ++eL +l+P+ + ++++ ls + ++ YI +L XP_027122695.1 22 RKTVERNRRIRMNGLIHELTSLVPPqHFVPSKEQLSQRDQIDQVAAYIMQL 72 5789*********************888888888**************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MNCFPRVMEN CSVNDASRKL DRKTVERNRR IRMNGLIHEL TSLVPPQHFV PSKEQLSQRD 60 QIDQVAAYIM QLKDRVEKPR KTKELVKRKI KTKGSNTGNS AIPGSRIPVV KIREIGSSLE 120 VVLVTGLGKN FGLHEVIIVL EEQGVEVVSI SISTMDNRIC HILHAQVKVS RLGVDTLTIY 180 DRLQKLIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 6e-25 | bHLH family protein |