PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027122682.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Trihelix | ||||||||
Protein Properties | Length: 345aa MW: 38092.7 Da PI: 9.9449 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49.1 | 1.5e-15 | 52 | 135 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v L+ea++ ++ +r+klk+++We+v+k++ +++ ++++qCk+k+e+++kry+ + +++ s++p++ +l+ XP_027122682.1 52 EWSEGAVSSLLEAYEAKWILRNRAKLKGQDWEDVAKHVsaraNSTKSPKTQTQCKNKIESMKKRYRSESATADA------SSWPLYPRLD 135 5*************************************87777777888999****************999986......4699999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MDREANSQEK PSLLSTTTSS NNNREDHHSP RKPQVVSSNT GGGNSDRLKR DEWSEGAVSS 60 LLEAYEAKWI LRNRAKLKGQ DWEDVAKHVS ARANSTKSPK TQTQCKNKIE SMKKRYRSES 120 ATADASSWPL YPRLDLLLRG NAPSHPPQLP PPPQLPPPPP PPPPVASNPP HLLLLEQPQQ 180 SLHPPPPPPA VAHANCPQNS HDSNGFDRVA KEDGVGPKLS DQESDKNAAD TDSSTPAMYS 240 DKEKLKSKNI KTRIEKKKQR RESCAIAESI RLLAEVVVRS EQARMDTMRE LERMRAESEA 300 KRGEMDLKRT EIIANTQLEI AKLFAAGNGN GNGKGVDSSL RIGRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54390.1 | 1e-107 | Trihelix family protein |