PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027121708.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 323aa MW: 35954.6 Da PI: 8.759 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.8 | 7.2e-56 | 10 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +k++++ ++ ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ XP_027121708.1 10 LPPGFRFHPTDEELITYYLINKISDSAFTG-RAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIYNS 103 79*************************999.89***************99999****************************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++elvg+kktLvfy+grap+gekt+Wvmheyr+ XP_027121708.1 104 vTSELVGMKKTLVFYRGRAPRGEKTNWVMHEYRI 137 89999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MEGELKEETL PPGFRFHPTD EELITYYLIN KISDSAFTGR AIADVDLNKC EPWDLPGKAK 60 MGEKEWYFFS LRDRKYPTGV RTNRATNTGY WKTTGKDKEI YNSVTSELVG MKKTLVFYRG 120 RAPRGEKTNW VMHEYRIHAK SSYRTAKDEW VVCRVFQKSA GGKKYPSNHS RAVNPYNLEI 180 GPGALSSQMM QADAFQIPMG RNYMSHAEVQ ELSRVFRGGS SSMNLQIPAQ MNYAAVAGGG 240 GCFTISGLNL NLGGAASTQP ILRAAPPVPS AMNQQDVTSS MITNGVMAND SGYGAAEINA 300 NAMSNRFVTM EHCPDLDNYW PTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 1e-116 | NAC family protein |