PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027115390.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 367aa    MW: 40964.6 Da    PI: 5.0897
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027115390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.66.2e-29133193158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     +dDg++WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs+edp v+e+tY+g+H +
  XP_027115390.1 133 VDDGHSWRKYGQKDILGANFPRAYYRCTHRnsrGCLATKQVQRSDEDPAVFEVTYKGRHSC 193
                     59***************************98899*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MEKVNPSEQK NLIIELSQGR EMANELRKQL DPVTSPETCE ALVEKIVSTY DKALAMLTWR  60
VLKEEETLPE TGRKESPLFH SPVLTTPITE GSNSSGFSKD QECNKDASRK RKTLPKWSEN  120
VRVCSASGLE GHVDDGHSWR KYGQKDILGA NFPRAYYRCT HRNSRGCLAT KQVQRSDEDP  180
AVFEVTYKGR HSCIQAANSG SAIRSDGKEM HKPKKARSLA REGGNQMGAE QTLQHLGQGL  240
KVETEVSKTK EEIFRSFSFS FKGVGLDILE SQFFSDVMKD CDMMGSNSPT FLSPTTSESN  300
YFSSSCQMDN NFGIDNILQT SESDLTDMIS TPTSVISSSP FGDHDFSIDQ VDFDTSFTLD  360
DDLAYFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108113SRKRKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.19e-45WRKY family protein