PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027115296.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 365aa    MW: 39742.8 Da    PI: 6.7057
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027115296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.3e-30183241259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+ver+++dp + ++tY+geHnh+
  XP_027115296.1 183 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERNRSDPGIYIVTYTGEHNHP 241
                     79************************9988****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MADDWDLQAV VRGCTATTTT TSGSSAATAT CTGNSFRPLC GFEPHQDGNF LCFQDLFFEP  60
RSQSSISAVV DQDLHDLYKP FFPKSSPPLS PQSIPISPLS VLGGLQDLSQ QPPQQQQQQP  120
KKQLQQQQQQ IYQPKHSSTL LPIGASSRSS GANGSSSTSN HRSKRRKNQL KRVCQVPAEA  180
SSSDMWSWRK YGQKPIKGSP YPRGYYRCST SKGCLARKQV ERNRSDPGIY IVTYTGEHNH  240
PMPTHRNSLA GSTRNKPATP QSTSSGDPSK PSSSPPVSPS ASVSPAPEKL ELETSKEEIL  300
EDEEDDVSGF EMAMDDDFFE GLEEFAGKSA VTDNFSSDHF PQSMQQLPWL ANNANSTTGT  360
AAGGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.16e-63WRKY family protein