PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027113755.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 28642.8 Da PI: 7.914 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.8 | 1.7e-12 | 72 | 124 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++ h +ErrRR ++ + ++ Lr llP + +++K s ++ L Av++Ik+++ XP_027113755.1 72 KKAYHRDIERRRRLEMAELYASLRNLLPLeC---KKTKGSASDHLLDAVNHIKHME 124 5788*************************88...********************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MAVHPDLEPA IPHQDLQNQV VASSLASRQE KTEEIIIRNN INTAPKRQTK ASSAIRPDNH 60 DSGKNPDESK QKKAYHRDIE RRRRLEMAEL YASLRNLLPL ECKKTKGSAS DHLLDAVNHI 120 KHMEKNIREL EVKRDKQINL MAGSSNLDVK IVEETNSSAI KFTLRQCSGG GIEILMKNYL 180 ADTKWFPLSK ILDVLLDEGL AVVSCVCTKV NEEFLYTIQT EANADVDLIC LQEKLTKNVV 240 TGKDLKVLEQ YRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 6e-32 | bHLH family protein |