PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027112077.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 338aa    MW: 37431.5 Da    PI: 6.803
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027112077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.2e-1157106154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r++ +  rE+ RRdr+N+ f+eL   l ++     +K++Ka+iL+ A++ +k+L
  XP_027112077.1  57 RKVQKADREKLRRDRLNEQFAELGNTLDPD----RPKNDKASILTDAIQMVKEL 106
                     5677889********************997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MDQFNHQETV YHHQQVQPPN PPLPEFGQPP PDMHLSSNRP NLDSRPEAVP KDSIATRKVQ  60
KADREKLRRD RLNEQFAELG NTLDPDRPKN DKASILTDAI QMVKELTAQI DKLKAEHAAL  120
NEESRELTQE KNDLREEKAS LKSDIESLNA QHQQRVRAMY PWAGMDHSVV MHPASYPFPL  180
PMPIPAGPIP MHPSLQPFPL YGNQNAAVVP SPVSTFVPYM APNSIIEQQS TQHVSQVTQP  240
GSRSHTSSRQ DSRPKACNQK DSRSEKSETS DDVATDLELK TPGSTVEQDV SPGQRKAKRS  300
SRKESNITEG SSSSRCSSSH SVQAASSSSV VGGTKTDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.16e-79bHLH family protein