PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027111836.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

VOZ

Protein Properties

Length: 485aa MW: 53557 Da PI: 5.1601

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027111836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	419.1	7.4e-129	206	425	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 ppp+aflgpkcalwdc+rpaq sew+ qdycs +hat+a eg pg++pvlrp+gi+lkd+llfaalsak+qgk+vgipecegaat+kspwna XP_027111836.1 206 PPPAAFLGPKCALWDCPRPAQRSEWCqtsQDYCSGYHATIAPAEGYPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATTKSPWNA 300 89*********************944459************************************************************ PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187 +elfdl +lege irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp++++ewhlyeyein++d +alyrlel XP_027111836.1 301 PELFDLVVLEGEMIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEYGGLKRSYYMDPQPMKNYEWHLYEYEINKYDVCALYRLEL 395 ******************************************************************************************* PP VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217 klvd+kks+kgk+++ds++dlqk++ +lta XP_027111836.1 396 KLVDGKKSPKGKIATDSVTDLQKQMKKLTA 425 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MGKGSKSGAC KSASHQLFKD RAKNRVDDLQ GMFSDLQSAR KESRSIDVAV LEEQVHQMLR 60 EWKAELIEPS PASSLQGGSL GSFSSDIYRL LQLCEEEDDA TSALAAPKSE PDAQKADSGA 120 VFQEGFVAAQ ASQEQSFQLL DQCKNSPAGA NSMGVNNLGL PTQLEYHTFD LHQDFENQYF 180 QGFDGTGLCG EDALPQIAGF VQNFCPPPAA FLGPKCALWD CPRPAQRSEW CQTSQDYCSG 240 YHATIAPAEG YPGMAPVLRP GGIGLKDNLL FAALSAKAQG KDVGIPECEG AATTKSPWNA 300 PELFDLVVLE GEMIREWLFF DKPRRAFESG NRKQRSLPDY TGRGWHESRK QVMNEYGGLK 360 RSYYMDPQPM KNYEWHLYEY EINKYDVCAL YRLELKLVDG KKSPKGKIAT DSVTDLQKQM 420 KKLTAEFPSD KQRAIKGGAK AASKDAAGSI YSTPNRMPPT GEGFEYSTGA SYEYLVDNLN 480 GYYVT

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MGKGSKSGAC KSASHQLFKD RAKNRVDDLQ GMFSDLQSAR KESRSIDVAV LEEQVHQMLR  60
EWKAELIEPS PASSLQGGSL GSFSSDIYRL LQLCEEEDDA TSALAAPKSE PDAQKADSGA  120
VFQEGFVAAQ ASQEQSFQLL DQCKNSPAGA NSMGVNNLGL PTQLEYHTFD LHQDFENQYF  180
QGFDGTGLCG EDALPQIAGF VQNFCPPPAA FLGPKCALWD CPRPAQRSEW CQTSQDYCSG  240
YHATIAPAEG YPGMAPVLRP GGIGLKDNLL FAALSAKAQG KDVGIPECEG AATTKSPWNA  300
PELFDLVVLE GEMIREWLFF DKPRRAFESG NRKQRSLPDY TGRGWHESRK QVMNEYGGLK  360
RSYYMDPQPM KNYEWHLYEY EINKYDVCAL YRLELKLVDG KKSPKGKIAT DSVTDLQKQM  420
KKLTAEFPSD KQRAIKGGAK AASKDAAGSI YSTPNRMPPT GEGFEYSTGA SYEYLVDNLN  480
GYYVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein