PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027111804.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 174aa    MW: 19645.3 Da    PI: 8.6898
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027111804.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.31e-111259555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     + +Er+RR+r+++ +++L +l+P++   + +  s  + Le+A++YIk++q
  XP_027111804.1 12 RKTIERNRRNRMKTLYSKLTSLIPPQ---SREASSLPDQLEEATNYIKKMQ 59
                    678**********************9...8888****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MEPNPSSSKA DRKTIERNRR NRMKTLYSKL TSLIPPQSRE ASSLPDQLEE ATNYIKKMQI  60
KLEKLKERRD FTNGTRLSSD TDTASAGLRL PHIDIQERGS ALEVVLITKS DCQFMFTETI  120
RLLHEEGAEV VNASFSVLDE TIFHTVHSKI GESAPCSAAA RISEKLKKYV YGDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-42bHLH family protein