PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027110130.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 377aa    MW: 42030.4 Da    PI: 6.9593
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027110130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.31.8e-29148209159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp+++e+tY+g+H+++
  XP_027110130.1 148 LDDGFSWRKYGQKDILGAKHPRGYYRCTHRhvqGCLATKQVQRSDEDPTIFEVTYRGRHTCN 209
                     59***************************99999**************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MENSADWELG NLINELMLGR ELAKQLQVRI NAPSSSPESR ELLVHKIINS YEKVLNMLKS  60
NAAVRVGERE QSTGTTIAMS ESRSRQNTGL AIGMPDSPRS LSASPHSDDS DREFRDQDSR  120
DVTRKRKAMP RWTKHVQVCP GMGLEGPLDD GFSWRKYGQK DILGAKHPRG YYRCTHRHVQ  180
GCLATKQVQR SDEDPTIFEV TYRGRHTCNQ GSEPKPPSAA AEKPETSSQG KHRQVTSQPQ  240
QNQQGILLSF QRDLKVNTKD LDSHNQHFPT FDFASTSTTK PETHPFLPSL TDNNFAGDLS  300
PPFMTPLTSG SDYFPVSPTH ISSYAENQNS YASESEFTGL ISAATSTTNS PTVGSDFPFS  360
QIGFDTNFTF DNSRFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.16e-54WRKY family protein