PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027109934.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 634aa MW: 70490 Da PI: 4.9397

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027109934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.9	7e-52	10	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptdeel+++yL+ k++g + ++ ++i+evdi+k ePwdLp ++v++ ++ew+fF+++d+ky++g+r nrat +gyWkatgkd+++ XP_027109934.1 10 LPVGYRFRPTDEELIDHYLRLKINGFDKDV-SIIREVDICKREPWDLPvlSRVESYDNEWFFFCPKDRKYQNGQRLNRATMKGYWKATGKDRNIR 103 799**********************999.89***********6448999999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++kg+++g+kktLvfy+grap+g++t+Wv+heyr+ XP_027109934.1 104 TRKGTKIGMKKTLVFYTGRAPDGQRTNWVIHEYRA 138 *******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MMTVLPVKQL PVGYRFRPTD EELIDHYLRL KINGFDKDVS IIREVDICKR EPWDLPVLSR 60 VESYDNEWFF FCPKDRKYQN GQRLNRATMK GYWKATGKDR NIRTRKGTKI GMKKTLVFYT 120 GRAPDGQRTN WVIHEYRATN KELDGTHPGQ GSFVLCRLFK KHELKQDETA DGSNLDEVET 180 IVPSPTTEKS PLEDGNSEAL TPVAGSQAEV HPSSAESCPA KGSDGAIVVN PLPTSWQNDC 240 SLSAEEKGQV IDPTCIQSDP DLIESLRDIF DDPIPEALDW KIFSPLHSQV QLELGSGYMC 300 NPVSNDINCD AKSMASQYGT NTYDVNKFLN SVLVNSDEYS YEESCINAIS TVECGTPGDT 360 KPMNGAFVRD GGSCSDSEAE VTQGQFEAGF FESELFMGNI EGYGTLQMAN MEQDAHRADV 420 SIDNQEGKLN LAGNNHLGHN AYAAVFNGSV VPDFLSTEVP GVHNNDTGTD STSGTGIKLR 480 SRQFQNFSNN PTFAAHGIAP RRLRLQNKLQ IGPVQCSLLR ESVCTEENDD GQSAVTEVLQ 540 DEKATKRNTD AAYTEEKGDV LLKKCNKNVG GSTVGLRESR GEFLSTYIKN CVRTPSKEDW 600 LHVVPSPMFM RKIFVIITIL VVFIGIWQFF GVQK

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MMTVLPVKQL PVGYRFRPTD EELIDHYLRL KINGFDKDVS IIREVDICKR EPWDLPVLSR  60
VESYDNEWFF FCPKDRKYQN GQRLNRATMK GYWKATGKDR NIRTRKGTKI GMKKTLVFYT  120
GRAPDGQRTN WVIHEYRATN KELDGTHPGQ GSFVLCRLFK KHELKQDETA DGSNLDEVET  180
IVPSPTTEKS PLEDGNSEAL TPVAGSQAEV HPSSAESCPA KGSDGAIVVN PLPTSWQNDC  240
SLSAEEKGQV IDPTCIQSDP DLIESLRDIF DDPIPEALDW KIFSPLHSQV QLELGSGYMC  300
NPVSNDINCD AKSMASQYGT NTYDVNKFLN SVLVNSDEYS YEESCINAIS TVECGTPGDT  360
KPMNGAFVRD GGSCSDSEAE VTQGQFEAGF FESELFMGNI EGYGTLQMAN MEQDAHRADV  420
SIDNQEGKLN LAGNNHLGHN AYAAVFNGSV VPDFLSTEVP GVHNNDTGTD STSGTGIKLR  480
SRQFQNFSNN PTFAAHGIAP RRLRLQNKLQ IGPVQCSLLR ESVCTEENDD GQSAVTEVLQ  540
DEKATKRNTD AAYTEEKGDV LLKKCNKNVG GSTVGLRESR GEFLSTYIKN CVRTPSKEDW  600
LHVVPSPMFM RKIFVIITIL VVFIGIWQFF GVQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	2e-86	NAC family protein