PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027109362.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 128aa    MW: 14152.8 Da    PI: 3.7781
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027109362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer59.86.2e-191865654
     ZF-HD_dimer  6 YkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHR 54
                      +C  NhAa l   +vDGC Ef+++ ge+gt++al CaAC CHR FH 
  XP_027109362.1 18 SMQCFYNHAACLNMFVVDGCEEFIAA-GEDGTPEALICAACWCHRRFHQ 65
                    568**********************9.999******************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MAANILPIRD ESVIFVRSMQ CFYNHAACLN MFVVDGCEEF IAAGEDGTPE ALICAACWCH  60
RRFHQIVEFQ VPIPAPLPPH ENPEIQIPAE PVVELQFAED APNSPPPVEE SSEEESNVGD  120
LEEGSFDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.14e-16ZF-HD family protein