PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027109046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 29258.2 Da PI: 6.2851 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.4 | 7.9e-11 | 90 | 142 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +r+ h +Er+RR ++ + + Lr llP+ ++K s ++ + +A++YIk+++ XP_027109046.1 90 KRAFHRDIERQRRLEMANLHASLRNLLPSeY---IKGKRSMSDHVLEAINYIKHME 142 7999*************************77...********************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDDFTKYMFP LQHDEILSFA PIPIIHPYLD PTIHHQDLEN QGASSLASHQ QNTEEIVINN 60 HVNKAWKSQR KPASAIRDDQ NVKGRNPEQK RAFHRDIERQ RRLEMANLHA SLRNLLPSEY 120 IKGKRSMSDH VLEAINYIKH MEKNIGELEV KRDKLRNLTG ESSNLDSKRV NETNSLSITF 180 TVEPCSGGGF EILMKNYLTD NNWLPLSRIL DVLLDEGITV VNCVCTKVNE ECLYTIQTEA 240 THMSDVDLIS LQVLI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 102 | KRAFHRDIERQRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 2e-36 | bHLH family protein |