PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027105613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | HSF | ||||||||
Protein Properties | Length: 378aa MW: 43010.2 Da PI: 4.5582 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 110.9 | 9.1e-35 | 13 | 104 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+ ++ ++sws n++sf+v+++ ef++++Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +ll++ XP_027105613.1 13 FLTKTYEMVDDPLTNAIVSWSCNNRSFIVWNPPEFSRDLLPQYFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANDDFVRGQPHLLKN 98 9********************999****************************************9998.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_027105613.1 99 IYRRKP 104 ***985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 378 aa Download sequence |
MDEPCSSNVL PPFLTKTYEM VDDPLTNAIV SWSCNNRSFI VWNPPEFSRD LLPQYFKHNN 60 FSSFIRQLNT YGFRKIDPEQ WEFANDDFVR GQPHLLKNIY RRKPVHSHSG QGAVESQLSE 120 SERRRYKDDV ERLKSDKEAL LFELQRYKQE EQRFELQVLG TTESVQLMEQ KQKNMMSFLS 180 KILQRPILAL ELMPEPHIHE RKRRIPGNSY LNEDISMANT QINSQILQKE QLDASSLLAF 240 NKDLLEELDS TLSFWENILI NVGQACDRLT SSPALVESTS CAGSPVVSYT EPNTNDVSVG 300 PKISEIDMDC DQNTNIAVIN DTANSDELVA MNPTNVPTNG PTGVNDVFWE QFLTENPGST 360 NSSEVKVNIM IMAGFGGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G18880.1 | 4e-94 | HSF family protein |