PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027103290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YB | ||||||||
Protein Properties | Length: 203aa MW: 22860.7 Da PI: 5.9565 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 159.5 | 5.2e-50 | 46 | 141 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 eqdr+lPianv+r+m+++lP akisk+aket+qec++efisfvt+easdkc +e+rkt+ngdd++wal+tlGf+ y+e++ yl+kyre+e++ XP_027103290.1 46 DEQDRLLPIANVGRVMRQILPPSAKISKEAKETIQECATEFISFVTAEASDKCYKENRKTVNGDDICWALSTLGFDTYAEAMLRYLHKYREFERQ 140 69*******************************************************************************************98 PP NF-YB 97 k 97 + XP_027103290.1 141 R 141 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MTCAHSLHTY ASVQKYIYLY VLMIDEGATC QHSEAKVIHL TSEMVDEQDR LLPIANVGRV 60 MRQILPPSAK ISKEAKETIQ ECATEFISFV TAEASDKCYK ENRKTVNGDD ICWALSTLGF 120 DTYAEAMLRY LHKYREFERQ RVNQSKASNL ENEAHTPIRA STDSTDSDGS NLQPEKQSES 180 PIAFEFRVLE KGQSSKIKPA ATG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09030.1 | 3e-59 | NF-YB family protein |