PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027103151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 252aa MW: 29035.8 Da PI: 9.471 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 43.4 | 6e-14 | 10 | 100 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE..TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled..esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f k+ p+d+ +s l lp +f++ +++ + ++ l++ + r W v++ k + ++++GW++F +n L+ gD +vF+++g +ef XP_027103151.1 10 FMKAYFPPDSKQS--LKLPSSFTSFLKSS--LPDKVFLKNhyDDKRIWAVEV--AKIENDLFFQAGWSQFLAENCLEFGDLLVFQYNGGQEF--D 96 6677777777665..9******9666654..77899999954555*******..********************************987777..6 PP EEEE CS B3 94 vkvf 97 +k++ XP_027103151.1 97 FKIL 100 6665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MKAVRQYPAF MKAYFPPDSK QSLKLPSSFT SFLKSSLPDK VFLKNHYDDK RIWAVEVAKI 60 ENDLFFQAGW SQFLAENCLE FGDLLVFQYN GGQEFDFKIL GKTADKREVI YAFDFSSEEQ 120 QEEEYPQEME SENKSRRGAV GLKTKSNSDS GRQEEFEEVS SKKKQKRDFR GSAARKRSLQ 180 RREISENKAG RSIKACGKGV HFIDNTADAE FKSRDDRPIT PCFVAKVDEK RSNLVHVPKD 240 LSRPVVFILN KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G60142.1 | 5e-14 | B3 family protein |