PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027101672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | G2-like | ||||||||
Protein Properties | Length: 179aa MW: 20325.4 Da PI: 9.7095 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.4 | 4.9e-31 | 18 | 71 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLHe+F+eave+LGG++kAtPk i+++m+v gL ++hvkSHLQ+YR XP_027101672.1 18 PRLRWTPELHEHFIEAVEHLGGKHKATPKGIVQMMGVSGLQVSHVKSHLQMYRN 71 8****************************************************5 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.7e-16 | 19 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +++av+ lGg+ t+k I ++mg g+ ++ks++q+y+ XP_027101672.1 19 RLRWTPELHEHFIEAVEHLGGKhkaTPKGIVQMMGvSGLQVSHVKSHLQMYR 70 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MEMCNRTGVR KYKKSAFPRL RWTPELHEHF IEAVEHLGGK HKATPKGIVQ MMGVSGLQVS 60 HVKSHLQMYR NMKKRATINL VVPMKLHEEE TPDAVVWSLT RKVGKDQEGP PKERKEPESS 120 ITCKSRGKNE TINQGDPLLN FQVIQGDTSC FYASKESENG IFDFLQSIAE CGKKGNLWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02060.1 | 1e-25 | G2-like family protein |