PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027099598.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 338aa    MW: 37204.8 Da    PI: 7.3514
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027099598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.43e-3250108259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                     ++v Y+eClkNhAa++Ggha+DGCgEfmp ++++ +++++l+CaACgCHRnFHRreve+
  XP_027099598.1  50 TAVAYRECLKNHAANIGGHALDGCGEFMPCPTATaADPTSLNCAACGCHRNFHRREVEH 108
                     5799**************************999999********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGLTNISTPT TTPDTDNDTP PHTQPIRSFS FTNGSSKYHH RHHRQPPPQT AVAYRECLKN  60
HAANIGGHAL DGCGEFMPCP TATAADPTSL NCAACGCHRN FHRREVEHSP FITTTAAPHF  120
LEFRQHRRSS SSPSPPPQQP PTLSYPPTQM LLALSTAAHD DQQVPNHHQV ATPVTPRETK  180
AAAENLSGRK RFRTKFSQEQ KEKMHSFAEK MGWKMQKCDD NMVQNFCNEI GVARGVLKVW  240
MHNNKNTVGR RDISSTITIT NPAAATANIT EEDKSNSNNI RHHGGIGGSP ENGGYNINNS  300
CINNDEEENS ESHYCNNESG HANLDLDHNN TNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.13e-55ZF-HD family protein