PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027099570.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 317aa MW: 36255.6 Da PI: 7.0346

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027099570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.6	1.2e-32	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+a+e+LGG+ekAtPk +l++m+v gLt++hvkSHLQ+YR+ XP_027099570.1 19 PRLRWTPDLHHCFVHAIERLGGQEKATPKLVLQMMDVRGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	47.9	3.1e-15	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+a+++lGg t+k++ ++m g+t ++ks++q+y+ XP_027099570.1 20 RLRWTPDLHHCFVHAIERLGGQekaTPKLVLQMMDvRGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MGSCGRNGGV RQYIRSKVPR LRWTPDLHHC FVHAIERLGG QEKATPKLVL QMMDVRGLTI 60 SHVKSHLQMY RSMKNDVARQ AADRNITIEP RKQQSVQDLH EGGVEQENNM VYLHPFSDSQ 120 FIYNPPPTKR ARIEKMSSIS EKLQRCQRIR ESVTYDPYGD DDYGQTTAEK SGMIKEKEEG 180 RRDFRWWQQT HETATPIHIP FSLPQDFFQT LNPSSNAGPM EESHPFFKVA NQEEVKFEPS 240 KTAKSQNLIE KHYVQEETDD CGLSLSLSLH HPSTQISNVS STSEISEAIS SYSRNFNDCS 300 GSYLVQHTVN LDLSIAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	2e-34	G2-like family protein