PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027099168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 199aa MW: 22396.6 Da PI: 8.9326 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 63.3 | 7.7e-20 | 6 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv..ePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgy 82 p Gf+F+Pt+ee+++ L k ++++ ++++v++e +y + Pw+L k +++ y F+k +k +a +r+ r++ g+ XP_027099168.1 6 PIGFHFRPTEEEIITL-LWLKDTNQQKHITDVFPEKILYGAdaSPWKLFGddnvrlelcddsGKKRTKRMAYVFTKLSKMSA--NRTARTAGCGT 97 89************54.555545555566688888777754238****6346788888776422223346699*99999876..5********** PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 W+ + k + + +++ge +gl+k+L + ++ +++ W+mhey+l XP_027099168.1 98 WEGQAKAQYIPNSRGEIIGLRKMLSYVL-NSGSPQGGGWIMHEYSL 142 **************************94.45555789*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MDRDCPIGFH FRPTEEEIIT LLWLKDTNQQ KHITDVFPEK ILYGADASPW KLFGDDNVRL 60 ELCDDSGKKR TKRMAYVFTK LSKMSANRTA RTAGCGTWEG QAKAQYIPNS RGEIIGLRKM 120 LSYVLNSGSP QGGGWIMHEY SLAGSLLDRI GPTDYVVCRI TIDDEKYIEV KKVAEAKQGV 180 NQSGSMRCTE NPKVLGKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-15 | NAC family protein |