PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027098316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 175aa MW: 19298.5 Da PI: 9.9108 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22.6 | 1.9e-07 | 14 | 93 | 7 | 52 |
HHHHHHHHHHHHHHHHHHCTSCC.C...................................TTS-.STCHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.as................................kapskK.lsKaeiLekAveYIk 52 +Er RR+++++ +++L +ll + as k +++ s a+i+ +Av+ I XP_027098316.1 14 VMERHRRQQMKNLYSKLASLLLPpASevnlplpalldyslthvknlkeriqeleakkeKLKGEIgSSTADIVLQAVKIIE 93 68*******************99677***************************9999999999999**********9995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MQAGNLKPRT PRGVMERHRR QQMKNLYSKL ASLLLPPASE VNLPLPALLD YSLTHVKNLK 60 ERIQELEAKK EKLKGEIGSS TADIVLQAVK IIEKGPILEV NLETGLHKRF ILPEVISILE 120 EGGAQVLSAS YATLTDRVLY TISSEASSPR IGIETSRLHD RLKALGGTGC FFSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 1e-18 | bHLH family protein |