PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027097036.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 282aa MW: 30530.9 Da PI: 6.6821 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.2 | 9.6e-11 | 165 | 212 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq XP_027097036.1 165 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 212 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MDPQASYNLG CDTAAYNLAE IWPFPMNNGP GPGASAATSF HNTNDFVATM SMNMNVNSGV 60 NRDRDPMVME QAPNPTPNSS GGGGVRRRRD DDEAVKGVSN SSNGNAMKAC DSKKLKTAGA 120 HENREAEAEG EANSGKAAEP SPKPAEPPKQ DYIHVRARRG QATDSHSLAE RARREKISER 180 MKILQDLVPG CNKVIGKALV LDEIINYIQS LQRQVEFLSM KLEAVNSRLS PGIEGFPSKD 240 FGQQPFDSSG MAFASQAVRE YARGTSPDWL HMQIGGGFER SS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 86 | 116 | RRRRDDDEAVKGVSNSSNGNAMKACDSKKLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 2e-79 | bHLH family protein |