PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027096869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HB-other | ||||||||
Protein Properties | Length: 162aa MW: 18797.2 Da PI: 8.0775 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 49.9 | 5.6e-16 | 28 | 78 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ + +Lee+F+ n++p+++er+eL ++l+++ +++k+WFqN+R + k XP_027096869.1 28 RNSPDLVAQLEEYFKDNPHPNENERKELGRELRVDPKRIKFWFQNKRNQVK 78 56778899***************************************8766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MDPVNGGIGS DDEVSSNNSP KHKNQYHRNS PDLVAQLEEY FKDNPHPNEN ERKELGRELR 60 VDPKRIKFWF QNKRNQVKAQ IARAENHLLR EENQKIYLEN MMMRERMRCT VCSTCAGLAT 120 ATKQDDDRKL ILRQLLVENA QLKEEWERLV QLVASLPGGP GT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.2 | 5e-35 | HD-ZIP family protein |