PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027096798.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 338aa    MW: 37143.8 Da    PI: 7.1292
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027096798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.61.3e-3247105259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                     ++v Y+eClkNhAa++Ggha+DGCgEfmp ++++ +++++l+CaACgCHRnFHRreve+
  XP_027096798.1  47 TAVAYRECLKNHAANIGGHALDGCGEFMPCPTATaADPTSLNCAACGCHRNFHRREVEY 105
                     5799**************************999999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGLTNISTPT TTPDTDNDTP PHTHPIRSFP FTNGSSKYHH RQPPPQTAVA YRECLKNHAA  60
NIGGHALDGC GEFMPCPTAT AADPTSLNCA ACGCHRNFHR REVEYSPFIT TTAAPHFLDF  120
RQRRRSSSSP SPPPQQPPTL SYPPTQMLLA LSTAAHDDQQ VPNHHQVATP VTPRETKAAA  180
ENLSGRKRFR TKFSQEQKEK MHSFAEKMGW KMQKCDDNMV RNFCNEIGVA RGVLKVWMHN  240
NKNTVGRRDI SSTITITNPA AAATANITEE DKSNSNNIRQ HGGIGGSPEN GGYNINDSCI  300
NNDEEENSES HYCNNESGHA NLDLDLDHNN TNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.13e-55ZF-HD family protein