PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027096674.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 274aa    MW: 31518.5 Da    PI: 7.8821
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027096674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.18.3e-5491341128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL++++ ++++++ ++i+evdiyk++PwdLp+k++ +e+ewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s 
  XP_027096674.1   9 LPPGFRFHPTDEELIMYYLRNQAISRPCPV-SIIPEVDIYKFDPWDLPEKTEFGENEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKSIYS- 101
                     79****************************.89***************99999*****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++ vg+kk Lvfy+gr pkg ktdW+mheyrl
  XP_027096674.1 102 GSKYVGVKKALVFYQGRPPKGIKTDWIMHEYRL 134
                     999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVGRNSSDLP PGFRFHPTDE ELIMYYLRNQ AISRPCPVSI IPEVDIYKFD PWDLPEKTEF  60
GENEWYFFTP RDRKYPNGVR PNRAAVSGYW KATGTDKSIY SGSKYVGVKK ALVFYQGRPP  120
KGIKTDWIMH EYRLSEPRSQ PNKQNGSMRL DDWVLCRIYK KKNLGKALDI KAEDQSTETL  180
TTADAASCEP QQTQLSKFPR ICSLSHLWEM ECMGTISQLF GDNSYNAVYD NQNIVNSNGN  240
HVSRQLGEVP HQFQGNQSGI LNQPVYVHPV YEFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-113NAC family protein