PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027095851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 313aa MW: 33000.4 Da PI: 6.4059 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.2 | 8.2e-10 | 162 | 206 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L XP_027095851.1 162 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 206 99***********************55......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MANNPTDGPS DDFLEQILGF PAYAGAAAPT DPNLAPGNDA HALPPPMMLQ LSSGDASSHL 60 ASVGLGVGVG LGVGTGGTFH GGNFPLGLSL EQGKAGGFVK MEEASGSGKR FRDDVVDGRP 120 AASSVRPGFH GQPLPTTVPV VPHPPAIRPR VRARRGQATD PHSIAERLRR ERIAERIRAL 180 QELVPSVNKT DRAAMLDEIV DYVKFLRLQV KVLSMSRLGG AGAVAPLVTD IPISSVEEES 240 GEGGRPQPAW DKWSNDGTER QVAKLMEENV GAAMQFLQSK ALCIMPISLA SAIYHTQPPD 300 ASNLIKPETN PPP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 167 | 172 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.2 | 1e-104 | bHLH family protein |