PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027095620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 175aa MW: 19333.6 Da PI: 10.0812 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.3 | 8.6e-06 | 15 | 91 | 8 | 50 |
HHHHHHHHHHHHHHHHHCTSCC.C...................................TTS-.STCHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.as................................kapskK.lsKaeiLekAveY 50 Er RR+++++ +++L +ll + as k +++ s a+ + +Av+ XP_027095620.1 15 TERHRRQQMKNLYSKLASLLLPpASevnlplpalldyslthvknlkeriqeleakkeKFKGQIgSSTADFVLQAVKI 91 6*******************995657777777777777777777777776666666555555555556666666555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MQAGNLKPRI PRGVTERHRR QQMKNLYSKL ASLLLPPASE VNLPLPALLD YSLTHVKNLK 60 ERIQELEAKK EKFKGQIGSS TADFVLQAVK IIEKGPILEV NLETGLHKRF ILPEVISILE 120 AGGAQVLSAS YATLTDRVLY TISSEASSPR IGIETSRLHE RLKALAGTGC FFCSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 6e-24 | bHLH family protein |